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CHRU de Lille
- Bio Informaticien
Lille
2013 - maintenant
Design and implementation of a bioinformatics workflow for diagnostic purposes for high-throughput sequencing activity of 9 different themes. Design and development of bioinformatics tools for analyzing data generated on ILLUMINA MiSeq, LIFE PGM / PROTON. Key words:
RubyOnRails, Ruby, Bash, Perl, GATK, samtools, bedtools, OAR.
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Institut pour la Recherche sur le Cancer de Lille
- Bio Informaticien
2011 - 2013
Analysis and integration of data miRNAs sequencing (SOLID 4) in the GHEDI national project : alignment analysis, variant detection, quantitative analysis and study of metabolic pathways. Development of a pipeline on a cluster resource, in order to search/predict miRNAs implications in prognostic and therapeutic results. Keywords: BASH, Perl, SHRimp2.0, MIRDeep2, samtools, bedtools, TORQUE / Maui.
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Une année autour du monde en sac à dos.
- Voyageur-routard, niveau expert.
2010 - 2011
18 pays traversés, 4 continents découverts.
Enrichissement personnel, découverte de cultures et de modes de vie, utilisation intensive de l’anglais et de l’espagnol. Visites d’ONGs (PSE au Cambodge, Partenaires en Birmanie) et participations bénévoles.
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Centre de genomique de Québec - Plate-forme de Protéomique
- Bio Informaticien
2009 - 2010
Analysis, conception and realization of a proteomic data management software interfacing coming from ProteinPilot3 software with the RubyOnRail framework.
Improvement and development of a LIMS in RubyOnRails.
Analysis and interpretation of data from mass spectrometer, implementation of search strategy from publications.
Keywords : Ruby, RubyOnRails, MVC model, XML, MySQL, Perl, Mascot, ProteinPilot, Scaffold, X!Tandem
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Atos Worldline
- Software Engineer
Bezons
2008 - 2009
Atos WorldLine Seclin - WoltersKluwer NL Team - Analysis, Conception and realisation of a new consultation portail for juridics and laws texts for the Netherland lawyers.
Keywords : JAVA/J2EE, MVC Model, XML/XSL/RDF, SparQL, JSP/servlet, HTML, CSS, Perl, Ksh
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Institut Pasteur Guadeloupe
- Bio Informaticien
Paris
2006 - 2008
Bioinformatic Software engineer in the ”Tuberculosis and mycobacteria” team at the research center Institut Pasteur de Guadeloupe (under direction of Dr N.Rastogi), development and administration of an International genotyping database of Mycobacterium tuberculosis. Scripting, conception and elaboration of DB consultation tools and datamining analysis tools.
Keywords : Molecular Biologie, Genetic, Genomic, MySQL, PERL, PYTHON, JAVA/Javascript, CVS, JSP/servlet, HTML
